Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs113651676 chr14:73537688 G/T 4.61E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs113723352 chr2:98310765 C/T 2.22E-16 169 26.27 18.63 2.03 KM Plot
UCEC rs113774566 chr14:73655778 C/T 4.61E-7 173 22.57 31.47 10.33 KM Plot
UCEC rs113901631 chr14:73674929 G/A 4.61E-7 173 22.57 31.47 10.33 KM Plot
UCEC rs113909062 chr4:1130633 A/G 7.51E-7 168 22.75 20.33 10.33 KM Plot
UCEC rs114087090 chr3:48074222 G/A 7.73E-7 171 22.6 22.25 11.53 KM Plot
UCEC rs114336570 chr3:48050556 A/G 6.44E-6 174 22.63 20.13 11.53 KM Plot
UCEC rs114338362 chr3:47965175 G/A 6.44E-6 174 22.63 20.13 11.53 KM Plot
UCEC rs114436730 chr3:48076557 G/A 6.44E-6 174 22.63 20.13 11.53 KM Plot
UCEC rs114968983 chr3:48077784 T/G 6.54E-7 173 22.6 22.25 11.53 KM Plot
UCEC rs115292751 chr3:47804800 C/A 8.11E-6 173 22.63 18.67 11.53 KM Plot
UCEC rs115346602 chr3:47855623 C/T 7.73E-7 171 22.6 22.25 11.53 KM Plot
UCEC rs11539461 chr14:77935659 G/A 1.61E-10 173 21.55 29.5 8.32 KM Plot
UCEC rs115402061 chr3:48132687 C/T 6.91E-6 173 22.63 21.6 11.53 KM Plot
UCEC rs115410520 chr3:48002977 A/G 6.44E-6 174 22.63 20.13 11.53 KM Plot